microbetag: simplifying microbial network interpretation through annotation, enrichment tests and metabolic complementarity analysis

Haris Zafeiropoulos et al. (Oct. 2024)

Microbial co-occurrence network inference is often hindered by low accuracy and tool dependency. We introduce microbetag, a comprehensive software ecosystem designed to enhance network annotation. Nodes (taxa) are enriched with phenotypic traits, while edges represent metabolic complementarities, highlighting potential cross-feeding relationships.

You can read the full pre-print on biorxiv. https://doi.org/10.1101/2024.10.01.616208